BIT Life Sciences' 2nd AnnualBioSoft-2010 Theme: Open A New World For IT Industry
Time: June 23-25, 2010 Venue: Dalian World Exposition Center, Dalian, China
Experts from both academia and industries are invited to present contemporary information from current research through commercial implementation of new technologies. Time allotted for oral presentations will be 25 to 40 minutes. English is the conference language.
Time
Activies
June 23, 2010
14:00-17:00
Opening Ceremony Moderator Dr. Guohui Li, Principal Investigator, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, China
14:00-14:05
Chair' s Opening Remark
14:05-14:20
Executives of GO and NGO
Governmental Regulatory Officers
Leading Scientists
Industrial Leaders in Bio-Soft
Sponsors
Keynote Forum Venue: No. 10 Meeting Room, 2F
14:20-14:50
Title: The New Information Age in Life Sciences and Clinics: From Static Data Warehouses to Decision Support based on Dynamic Semantically Integrated Data and Knowledge Networks
Dr. Erich Alfred Gombocz, Vice President, Chief Scientific Officer, IO Informatics, Inc., USA
14:50-15:20
Title: Who Powers Your Software?
Dr. Guoqing Li, Director, Computing Platform, BGI-sz, China
15:20-15:50
Title: Genomic Signal Processing: An Overview
Dr. Xiaodong Wang, Professor,Columbia University, USA
15:50-16:20
Title: To enhance drug discovery efficacy by computational chemistry and bioinformatics approaches Dr. Weiliang Zhu, Drug Discovery and Design Centre, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, China
June 23, 2010
18:00-20:00
Welcome Banquet
Track 1: Robust Hardware and Software for Bio-industry
Track 1: Robust Hardware and Software for Bio-industry
Time: June 24, 2010, Thursday, 08:30-12:10
Venue: No. 5 Meeting Room, 2F, DWEC, Dalian, China
Chair
Dr. Susanna-Assunta Sansone, Coordinator, European Bioinformatics Institute, UK
Co-chair
Dr. Yi-Qin Gao, Changjiang Professor, Peking University, China
08:30-08:55
Title: Reporting Standards for Multi-omics Studies: Focus on Synergistic Efforts Dr. Susanna-Assunta Sansone, Coordinator, European Bioinformatics Institute, UK
08:55-09:20
Title: ISA Infrastructure and Case Studies: Supporting Standards-Compliant Experimental Reporting and Enabling Curation at the Community Level Dr. Philippe Rocca-Serra, Technical Coordinator, European Bioinformatics Institute, UK Co-presenter:Dr. Eamonn Maguire, Lead Developer, European Bioinformatics Institute, UK
09:20-09:45
Title: Comprehensive Library for Modern Biotechnology (CLiMB): Sequence Analysis Section
Dr. Shaoguang Liang, Manager of bio-cloud application, Computing Platform, BGI-Shenzhen, China
09:45-10:10
Title: Toward High Efficiency Computing for Genomics: Merge the Gap between Silicon and Applications Performance Dr. Wang Bingqiang, Manager of Application Optimization, Computing Platform, BGI-Shenzhen, China
10:10-10:30
Coffee Break
10:30-10:55
Title: Sequence, Temperature, and Cosolvent Dependence of Simple Protein Structures Dr. Yi-Qin Gao, Changjiang Professor, Peking University, China
10:55-11:20
Title: Comprehensive Library for Modern Biotechnology (CLiMB): Database Section Mr. Jing Tian, Manager of Database Administration, Computing Platform, BGI-Shenzhen, China
11:20-11:45
Title: Periodic Analysis on the Psychotic Episode of Individual Schizophrenics by Data Construction Method
Dr. Hsiao-Fan Wang, Tshing Hua Chair Professor, National Tsing Hua University, Taiwan
11:45-12:10
Title: Parallel Optimization of MrBayes Using Graphic Processing Unit Dr. Gang Wang, Professor, Nankai University, China
Track 2: e-Life Sciences
Track 2-1: IT in System Biology and Computational Biology
Time: June 24, 2010, Thursday, 13:30-15:30
Venue: No. 5 Meeting Room, 2F, DWEC, Dalian, China
Chair
Dr. Pietro Cortona, Professor, École Centrale Paris, France
13:30-13:55
Title: Density-Functional Theory: a Tool in Drug Discovery, a Bridge between Quantum Chemistry and Biology
Dr. Pietro Cortona, Professor, École Centrale Paris, France
13:55-14:20
Title: One-dimensional Modeling of Blood Circulation in the Human Upper Limb and Its Application in the Analysis of Heat Transfer in the Image-based Hand Model Dr. Ying He, Professor, University of Science and Technology of China, China
14:20-14:45
Title: Accurate Charges for Docking of Metalloproteins
Dr. Art E. Cho, Professor and Chairman, Department of Biotechnology and Bioinformatics, Korea University, Republic of Korea
14:45-15:10
Title: AFMPB: An Adaptive Fast Multipole Poisson–Boltzmann Solver for Calculating Electrostatics in Biomolecular Systems Dr.Benzhuo Lu, Associate Professor, Chinese Academy of Sciences, China
15:10-15:30
Coffee Break
Track 2-2: Simulating Vital Function from the Atomic Level to Whole Body
Time: June 24, 2010, Thursday, 15:30-17:35
Venue: No. 5 Meeting Room, 2F, DWEC, Dalian, China
Chair
Dr. Jianming Hu, Professor, The Pennsylvania State University College of Medicine, USA
Co-chair
Dr. Ken Takahashi, Assistant Professor, Nagoya University School of Medicine, Japan
15:30-15:55
Title: Novel Strategies to Inhibit Hepatitis B Virus Reverse Transcriptase Dr. Jianming Hu, Professor, The Pennsylvania State University College of Medicine, USA
15:55-16:20
Title: Developing Accurate Quantum-based Polarized Force Field for Proteins Dr. John Zhang, Professor of Chemistry, East China Normal University, China
16:20-16:45
Title: How Do We Know Force Inside the Body? – Finite Element Stress Analysis
Dr. Ken Takahashi, Assistant Professor, Nagoya University School of Medicine, Japan
16:45-17:10
Title: Modeling Immune Response and Memory by Concepts of Network Theory
Dr. Chung-Ming Ou, Associate Professor, Kainan University, Taiwan
17:10-17:35
Title: Electrophysiological Simulation of Developmental Changes in Cardiomyocyte
Dr. Hitomi I. Sano, Research Associate, Keio University, Japan
Track 2-3: Bioinformatics in Genomics, Proteomics, Transcriptomics and Metabolomics Time: June 24, 2010, Thursday, 13:30-17:10
Venue: No. 6 Meeting Room, 2F, DWEC, Dalian, China
Chair
Dr. Jun Zhu, Director & Professor, Institute of Bioinformatics, Zhejiang University, China
Co-chair
Dr. Mitsutoshi Setou, Professor, Hamamatsu University School of Medicine, Japan
13:30-13:55
Keynote Speech:
Title:Information Systems to Define and Track Biomarkers for Personalized Genomics Dr. Xitong Li, Senior Manager and Head of Bioinformatics, Genomic Health, Inc., USA
13:55-14:20
Title: Identification of Comparative Molecular Interactions by Computationally Intensive Modeling Methods
Dr. Joe Song, Assistant Professor, New Mexico State University, USA
14:20-14:45
Title: SOAPas: Ab initio Detection of Alternative Splicing Events with RNA-Seq Dr. Zhiyu Peng, Director, Group of RNA Research, BGI Bioinformatics Center, China
14:45-15:10
Title: Computation and Presentation of Genetic Analysis for Complex Traits
Dr. Jun Zhu, Director & Professor, Institute of Bioinformatics, Zhejiang University, China
15:10-15:30
Coffee Break
15:30-15:55
Title: Gene-set Cohesion Analysis Tool (GCAT): A Literature Based Web Tool for Calculating Functional Cohesiveness of Gene Groups Dr. Lijing Xu, Research Associate, University of Memphis, USA
15:55-16:20
Title: GenomeMap – An Open Framework for Genome Annotation Visualization, Retrieve and Analysis
Dr. Lei Kong, Center for Bioinformatics, Peking University, China
16:20-16:45
Title: Development of Imaging Mass Spectrometry Instrument “Mass Microscope”
Dr. Mitsutoshi Setou, Professor, Hamamatsu University School of Medicine, Japan
16:45-17:10
Title: Intramolecular Excited Energy Transfer Pathways in Proteins: a Computational Approach
Dr. Janneth González Santos, Professor, Javeriana University, Colombia
Track 3: e-Solution for Integrative Drug Discovery and Development
Track 3-1: Computational Chemistry, Molecular Dynamics and Bioinformatics Time: June 24, 2010, Thursday, 08:30-12:10
Venue: No. 6 Meeting Room, 2F, DWEC, Dalian, China
Chair
Dr. Zhong Jin, Associate Professor, Computer Network Information Center, China
Co-chair
Dr. Jianguo Yu, Professor, Beijing Normal University, China
08:30-08:55
Keynote Speech:
Title: Computational Polypharmacology and it’s Applications for Traditional Chinese Medicine Dr. Xiaojie Xu, Professor & Director, Peking University, China
08:55-09:20
Title: GridMol: A Three-Dimensional Molecular Modeler and Visualizer in Grid Computing of Computational Chemistry
Dr. Zhong Jin, Associate Professor, Computer Network Information Center, China
09:20-09:45
Title: Theoretical Investigations on the Electron Transfer in Photosynthesis of Purple Bacteria
Dr. Takao Tsuneda, Deputy Unit Leader, Advanced Science Institute, Japan
09:45-10:10
Title: SimuPac – A Bio and Chem Simulation Software Package. Our Architecture and Implement Dr. Jianguo Yu, Professor, Beijing Normal University, China
10:10-10:30
Coffee Break
10:30-10:55
Title: From the Viral Tool Box: Assembling within the Lipid Membrane
Dr. Wolfgang B. Fischer, Associate Professor, Institute of Biophotonics, School of Biomedical Science and Engineering, National Yang-Ming University, Taiwan
10:55-11:20
Title: Molecular Dynamics Study of Liposomes: A Coarse-Grained Molecular Modeling Approach
Dr. Wataru Shinoda, Leader, National Institute for Advanced Industrial Science and Technology (AIST), Japan
11:20-11:45
Title: Spectral Tuning Mechanism in Photofunctional Proteins: A SAC-CI Theoretical Study
Dr. Jun-ya Hasegawa, Lecturer, Kyoto University, Japan
11:45-12:10
Panel Discussion
Track 3-2: Computer Aided Drug Designs Time: June 24, 2010, Thursday, 08:30-10:00
Venue: No. 8 Meeting Room, 2F, DWEC, Dalian, China
Chair
Dr. Jun Zeng, Co-founder and CSO, Qubist Molecular Design, Australia
08:30-08:55
Title: Advanced Methods in Fragment-Based Drug Design and Virtual Screening Applications Dr. Jun Zeng, Co-Founder and CSO, Qubist Molecular Design Pty. Ltd., Australia
08:55-09:20
Title: Advances and Challenges for Computational Drug Design Dr. Jung-Hsin Lin, Assistant Research Fellow, Academia Sinica, Taiwan
09:20-09:45
Title: Development of Element Modules for Virtual Liver and It's Application
Dr. Won Seok Oh, Principal Researcher, Bioinformatics & Molecular Design Research Center, Republic of Korea
09:45-10:00
Coffee Break
Track 4: e-Clinical Trials, e-Medicine and e-Health (e-CMH)
Track 4: e-Clinical Trials, e-Medicine and e-Health (e-CMH) Time: June 24, 2010, Thursday, 10:00-12:00
Venue: No. 5 Meeting Room, 2F, DWEC, Dalian, China
Chair
Dr. John Speakman, Associate Director, Clinical Products and Programs, Center for Biomedical Informatics and Information Technology, National Cancer Institute, US National Institutes of Health, USA
Co-chair
Dr. Sorena Nadaf, Director, University of California San Francisco, USA
10:00-10:20
Title: Security and Authentication Issues along the Clinical Trial Data Processing Chain: Challenges and Technical Solutions Dr. Elke Lang, Professor, Darmstadt University of Applied Sciences, Germany
10:20-10:40
Title: An Information Architecture to Realize the Promise of Molecular Medicine and Translational Research
Dr. John Speakman, Associate Director, Clinical Products and Programs, Center for Biomedical Informatics and Information Technology, National Cancer Institute, US National Institutes of Health, USA
10:40-11:00
Title: Building a Translational Research Vision at UCSF Dr. Sorena Nadaf, Director, University of California San Francisco, USA
11:00-11:20
Title: Protection of Bio-Information
Dr. Fengling Han, Royal Melbourne Institute of Technology, Australia
11:20-11:40
Title: Comparisons of Various Generations of the Synthetic Populations Dr. Alireza Taleei, Professor of Biometrical Genetics, University of Tehran, Iran
11:40-12:00
Title: A Meta-analysis on Acupuncture Therapies in the Treatment of Knee Osteoarthritis Dr. Xu Min, Assistant Professor, Hong Kong Baptist University, Hong Kong, China
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